Table 1 Web Interface Functions and Result layouts of mySORT and CIBERSORT for Comparison
Functions and Outputs | mySORT | CIBERSORT |
|---|---|---|
User interface | ||
Registration | Not required | Required |
Custom signature matrix | Not allowed | Allowed |
Immune-cell composition | ||
Relative proportion in the table | Yes | Yes |
Stacked bar chart | Yes | Yes |
Multiple data columns | Yes | Yes |
Data comparison | ||
Hierarchical clustering | Yes | No |
Cell diversity within a sample (alpha-diversity plot) | Yes | No |
Cell diversity among samples (beta-diversity plot) | Yes | No |
Data export | Yes | Yes |